To convert from module to traditional notation
As discussed on my Converting MIDI to traditional music score page, MidiNotate is the best way to transcribe from MIDI to notation (you can download a free trial here). Even Sibelius' tool doesn't do nearly as good a transcription. To get to MIDI format from module in the first place though, you'll need a MOD to MID converter. Hopefully your module package can save out in MIDI format by default, but otherwise, you'll need something like 2midi to do the work.
Finally, Midi Converter (freeware) might be of benefit because it converts between MIDI type 0 and 1 format.
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